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Hierarchical exploration of TRG genes through taxonomy of Bacteria

Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
Shewanella abyssi species 1 4,383 115 81
Shewanella aestuarii species 1 3,339 39 28
Shewanella aestuarii_A species 1 3,911 145 66
Shewanella algae species 1 4,324 103 44
Shewanella algicola species 1 4,429 117 52
Shewanella algidipiscicola species 1 3,723 56 64
Shewanella amazonensis species 1 3,723 69 34
Shewanella aquimarina species 1 3,801 79 21
Shewanella atlantica species 1 4,630 116 100
Shewanella avicenniae species 1 3,649 63 58
Shewanella baltica species 1 4,576 113 55
Shewanella basaltis species 1 3,720 65 40
Shewanella benthica species 1 4,824 147 79
Shewanella benthica_A species 1 4,128 138 86
Shewanella canadensis species 1 4,910 123 120
Shewanella carassii species 1 3,917 95 40
Shewanella chilikensis species 1 3,929 101 34
Shewanella colwelliana species 1 4,088 93 76
Shewanella corallii species 1 4,538 54 93
Shewanella cyperi species 1 3,576 40 44
Shewanella decolorationis species 1 4,233 94 28
Shewanella denitrificans species 1 3,904 56 100
Shewanella dokdonensis species 1 4,532 98 82
Shewanella donghaensis species 1 4,077 65 43
Shewanella electrodiphila species 1 4,382 75 55
Shewanella eurypsychrophilus species 1 4,958 123 98
Shewanella fidelis species 1 4,156 102 29
Shewanella fodinae species 1 3,567 63 73
Shewanella frigidimarina species 1 4,109 66 39
Shewanella gaetbuli species 1 3,369 34 46
Shewanella gelidii species 1 3,411 37 70
Shewanella gelidimarina species 1 4,280 113 70
Shewanella glacialimarina species 1 3,830 64 28
Shewanella glacialipiscicola species 1 3,574 65 35
Shewanella hafniensis species 1 4,470 106 80
Shewanella halifaxensis species 1 4,407 97 62
Shewanella hanedai species 1 5,067 108 100
Shewanella indica species 1 3,930 120 29
Shewanella insulae species 1 4,045 99 44
Shewanella intestini species 1 3,394 38 61
Shewanella inventionis species 1 4,380 122 84
Shewanella japonica species 1 4,205 64 43
Shewanella jiangmenensis species 1 3,804 65 64
Shewanella kaireitica species 1 4,340 124 40
Shewanella khirikhana species 1 4,189 66 48
Shewanella litoralis species 1 4,042 63 46
Shewanella litorisediminis species 1 3,701 66 46
Shewanella livingstonensis species 1 4,219 78 56
Shewanella loihica species 1 3,903 84 23
Shewanella mangrovi species 1 3,737 69 39
Shewanella marina species 1 4,264 36 99
Shewanella marinintestina species 1 4,189 83 36
Shewanella marisflavi species 1 3,765 75 42
Shewanella maritima species 1 4,019 59 104
Shewanella morhuae species 1 3,601 56 30
Shewanella nanhaiensis species 1 4,810 99 47
Shewanella olleyana species 1 3,909 72 52
Shewanella oncorhynchi species 1 4,412 101 44
Shewanella oneidensis species 1 4,595 124 61
Shewanella pealeana species 1 4,369 110 58
Shewanella piezotolerans species 1 4,593 150 68
Shewanella pneumatophori species 1 4,212 84 41
Shewanella polaris species 1 3,986 54 44
Shewanella profunda species 1 4,264 82 66
Shewanella psychromarinicola species 1 4,406 66 69
Shewanella psychrophila species 1 5,555 162 125
Shewanella psychropiezotolerans species 1 5,883 194 123
Shewanella putrefaciens species 1 3,824 55 31
Shewanella putrefaciens_C species 1 3,906 78 49
Shewanella sairae species 1 4,877 102 131
Shewanella salipaludis species 1 3,692 30 66
Shewanella saliphila species 1 4,021 61 27
Shewanella schlegeliana species 1 4,135 99 36
Shewanella sediminis species 1 4,655 108 72
Shewanella seohaensis species 1 4,032 84 17
Shewanella sp000014685 species 1 4,015 78 24
Shewanella sp000203935 species 1 4,531 83 77
Shewanella sp000217915 species 1 3,969 71 46
Shewanella sp001957125 species 1 4,880 141 106
Shewanella sp001957135 species 1 3,900 64 45
Shewanella sp002783505 species 1 4,102 70 49
Shewanella sp002836205 species 1 4,393 114 75
Shewanella sp002836315 species 1 4,128 64 26
Shewanella sp002873135 species 1 3,922 74 34
Shewanella sp004195335 species 1 5,768 116 280
Shewanella sp006494715 species 1 3,620 54 47
Shewanella sp009663145 species 1 4,242 75 37
Shewanella sp013214165 species 1 4,267 141 121
Shewanella sp013248905 species 1 4,396 54 119
Shewanella sp014163735 species 1 3,619 54 68
Shewanella sp014164505 species 1 4,855 132 104
Shewanella sp016757755 species 1 4,589 114 113
Shewanella sp019209865 species 1 3,764 57 110
Shewanella sp019457475 species 1 3,471 47 50
Shewanella sp019457515 species 1 3,748 77 51
Shewanella sp019457595 species 1 3,774 88 53
Shewanella sp019457615 species 1 3,921 73 36
Shewanella sp019654915 species 1 4,797 137 128
Shewanella sp019654955 species 1 4,150 64 57
Shewanella sp019654975 species 1 4,468 132 56
Shewanella sp019655055 species 1 4,242 111 67
Shewanella sp021412565 species 1 3,237 56 63
Shewanella sp021462625 species 1 3,096 50 136
Shewanella sp021513195 species 1 3,680 39 28
Shewanella sp022321485 species 1 4,527 76 328
Shewanella sp022398315 species 1 3,231 57 30
Shewanella sp022398325 species 1 4,243 112 39
Shewanella sp022410515 species 1 4,290 126 50
Shewanella sp023161665 species 1 4,219 92 40
Shewanella sp024363255 species 1 3,768 32 124
Shewanella surugensis species 1 5,625 36 395
Shewanella ulleungensis species 1 3,977 55 41
Shewanella vesiculosa species 1 4,352 65 49
Shewanella violacea species 1 4,087 101 108
Shewanella waksmanii species 1 4,439 92 87
Shewanella woodyi species 1 4,996 103 67
Shewanella xiamenensis species 1 3,968 82 33
Shewanella yunxiaonensis species 1 3,403 56 33