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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
2013Ark19i family 2 3,276 172 1,130
Aquaspirillaceae family 6 18,626 316 239
Burkholderiaceae family 940 4,696,532 78,899 75,644
Burkholderiaceae_A family 191 512,491 8,578 10,151
Burkholderiaceae_B family 1,145 4,677,405 42,984 66,494
Burkholderiaceae_C family 239 962,267 8,130 11,202
Burkholderiaceae_D family 8 12,635 437 424
Burkholderiaceae_E family 2 2,270 404 0
CADEHE01 family 1 5,018 304 0
CAIKXV01 family 6 25,663 342 403
Casimicrobiaceae family 46 170,184 1,628 5,501
Chitinibacteraceae family 37 142,363 1,923 3,437
Chitinimonadaceae family 6 25,026 368 736
Chromobacteriaceae family 55 214,165 3,263 2,552
Ferrovaceae family 26 51,483 531 815
Ga0077523 family 9 41,065 661 800
Gallionellaceae family 121 311,757 2,473 7,459
JABEVD01 family 10 24,651 378 286
JACMKV01 family 2 5,788 57 269
JACQAP01 family 2 8,422 18 294
JAEUMW01 family 2 7,706 89 157
JAEUOS01 family 2 10,441 47 136
JAHFQX01 family 1 2,528 27 0
JAHFRG01 family 1 1,604 44 0
JAJZQI01 family 2 5,139 52 55
JAJZUU01 family 1 2,865 43 0
JAKAFK01 family 2 6,892 68 237
Leeiaceae family 3 10,483 76 284
Methylophilaceae family 142 287,125 3,277 3,936
Neisseriaceae family 120 267,132 8,456 6,581
Nitrosomonadaceae family 120 332,086 7,474 11,114
Q3-R57-64 family 1 858 40 0
RBG-16-58-11 family 6 17,270 141 325
REEB80 family 1 1,893 98 0
Rhodocyclaceae family 402 1,449,600 10,517 22,386
SCOH01 family 2 9,097 105 453
SG8-39 family 87 328,653 2,700 5,117
SG8-40 family 3 10,148 132 481
SG8-41 family 59 247,162 1,360 4,270
SHXO01 family 3 10,636 105 243
SMCO01 family 1 3,703 102 0
Sulfuricellaceae family 15 46,291 304 714
Sulfuriferulaceae family 17 42,430 182 1,061
Thiobacillaceae family 108 314,491 1,991 4,293
UBA11063 family 15 32,944 1,979 2,513
UBA3031 family 10 18,091 307 333
UBA3065 family 4 7,725 104 132
UBA6910 family 3 10,505 295 0
UBA9220 family 5 13,091 247 102
Usitatibacteraceae family 24 90,288 979 2,522
WYBJ01 family 4 21,815 128 607