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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
16-39-46 order 5 7,930 851 319
43-37 order 1 1,466 183 0
ATCC43930 order 27 123,987 2,599 4,154
Acetobacterales order 425 1,689,091 30,067 34,382
Azospirillales order 76 451,896 13,981 6,529
BOG-932 order 3 12,331 319 450
Bin65 order 8 32,632 580 639
Bin95 order 10 41,124 781 855
Bin98 order 1 1,473 887 0
CACIAM-22H2 order 18 79,251 1,461 1,164
CADEGL01 order 3 10,591 344 0
CAISDR01 order 1 3,611 188 0
CAISOG01 order 2 3,170 209 191
CAIVPW01 order 5 12,153 327 342
CAIYWZ01 order 1 1,697 353 0
CAJWJK01 order 1 2,003 55 0
CALTWN01 order 1 1,043 41 0
Caedimonadales order 16 26,669 2,153 1,272
Caulobacterales order 574 1,948,512 47,931 40,111
DSM-16000 order 11 61,542 2,185 614
Dongiales order 15 69,085 1,545 968
Elsterales order 7 29,751 958 654
Ferrovibrionales order 12 55,563 1,143 1,036
G023898725 order 1 1,004 122 0
G02398745 order 1 933 275 0
GCA-002720895 order 7 6,154 106 43
GCA-016699305 order 1 1,992 211 0
GCA-2701885 order 3 5,396 109 40
GCA-2721365 order 1 3,803 120 0
GCA-2731375 order 8 36,850 448 632
GCA-2746255 order 3 5,478 49 110
GM7ARS4 order 2 3,228 251 0
Geminicoccales order 20 78,326 2,100 1,705
HIMB59 order 170 219,006 5,332 1,038
Holosporales order 8 8,585 1,149 1,008
JAAEOK01 order 1 4,249 130 0
JAAXGF01 order 3 8,131 573 0
JABSOH01 order 10 15,112 882 841
JACAEB01 order 2 4,924 53 181
JACQOE01 order 1 3,090 68 0
JACZXZ01 order 1 2,230 89 0
JAEUKQ01 order 3 5,420 223 263
JAEULC01 order 5 24,239 449 428
JAEULF01 order 1 4,310 208 0
JAGOMX01 order 2 3,418 442 0
JAGPBS01 order 1 1,785 240 0
JAJFFI01 order 1 2,918 178 0
JAJFIK01 order 2 6,722 75 427
JAJTHO01 order 1 1,803 189 0
JALRGP01 order 1 1,102 202 0
JAMZFT01 order 1 3,190 104 0
JANSWW01 order 1 3,640 146 0
Kiloniellales order 38 163,317 3,587 2,476
M2410 order 3 8,765 335 117
MC1 order 1 1,657 153 0
MED-G09 order 18 21,375 237 80
MPNO01 order 24 79,655 888 1,225
Micavibrionales order 126 270,539 11,708 13,295
Micropepsales order 70 235,360 6,233 6,964
Minwuiales order 4 17,001 258 279
Oceanibaculales order 4 14,760 126 118
Paracaedibacterales order 32 53,489 3,254 3,683
Parvibaculales order 55 151,146 2,344 2,784
Pelagibacterales order 1,192 1,236,524 13,030 4,410
Puniceispirillales order 131 237,070 2,815 2,838
RF32 order 260 384,422 16,483 10,136
RUG11792 order 15 12,693 1,574 1,087
Reyranellales order 62 367,710 8,152 5,252
Rhizobiales order 2,368 11,882,377 267,995 214,362
Rhizobiales_A order 8 9,084 326 684
Rhodobacterales order 1,479 5,508,080 51,421 83,665
Rhodospirillales order 113 416,458 8,467 7,643
Rhodospirillales_A order 148 507,902 10,508 8,719
Rickettsiales order 285 400,253 34,273 15,119
Rickettsiales_A order 8 4,450 997 123
Rs-D84 order 175 160,254 14,477 5,011
SHNJ01 order 1 1,962 343 0
SHVP01 order 3 9,200 173 191
SHVR01 order 1 2,782 68 0
SHVT01 order 2 4,064 57 71
SHVV01 order 3 8,226 87 156
SHVW01 order 2 8,957 47 192
SHVZ01 order 7 31,445 503 329
SHWA01 order 1 2,270 53 0
SMXP01 order 3 8,266 191 205
SMXQ01 order 8 22,623 274 374
SMXS01 order 5 15,898 384 234
SP197 order 8 29,410 446 903
SPJN01 order 1 1,921 69 0
Sneathiellales order 24 83,630 1,501 1,262
Sphingomonadales order 1,183 4,061,230 54,692 62,702
TMED109 order 8 12,322 136 102
TMED109_A order 14 18,379 174 113
TMED127 order 39 51,629 601 330
TMED2 order 2 6,077 325 288
TMED25 order 12 15,870 190 114
Thalassobaculales order 31 107,615 1,535 1,459
Tistrellales order 2 10,925 141 217
UBA11073 order 2 3,036 51 489
UBA11136 order 3 6,194 113 137
UBA11222 order 3 8,454 87 399
UBA1247 order 1 1,618 174 0
UBA1280 order 16 24,368 1,820 2,263
UBA2400 order 1 2,095 373 0
UBA2562 order 1 3,085 360 0
UBA2966 order 5 22,024 272 618
UBA3830 order 15 16,476 1,069 854
UBA6184 order 3 3,291 352 290
UBA6615 order 17 50,551 685 646
UBA7879 order 9 10,920 811 629
UBA7887 order 8 19,135 383 430
UBA7985 order 8 20,928 798 562
UBA828 order 16 50,380 409 737
UBA8317 order 1 1,730 94 0
UBA8366 order 35 140,933 2,360 2,475
UBA8558 order 1 1,233 19 0
UBA9219 order 21 41,663 2,502 1,953
UBA9655 order 17 31,486 1,914 1,281
VGDZ01 order 1 3,702 114 0
VGEJ01 order 1 3,154 127 0
VXPW01 order 6 18,995 336 712
WRAU01 order 2 2,223 300 0
Zavarziniales order 5 21,154 391 376