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Hierarchical exploration of TRG genes through taxonomy of Bacteria
Taxon name | Taxon rank | Species (n) | Proteins (n) | TRG genus (n) | TRG species (n) | Details |
---|---|---|---|---|---|---|
16-39-46 | order | 5 | 7,930 | 851 | 319 | |
43-37 | order | 1 | 1,466 | 183 | 0 | |
ATCC43930 | order | 27 | 123,987 | 2,599 | 4,154 | |
Acetobacterales | order | 425 | 1,689,091 | 30,067 | 34,382 | |
Azospirillales | order | 76 | 451,896 | 13,981 | 6,529 | |
BOG-932 | order | 3 | 12,331 | 319 | 450 | |
Bin65 | order | 8 | 32,632 | 580 | 639 | |
Bin95 | order | 10 | 41,124 | 781 | 855 | |
Bin98 | order | 1 | 1,473 | 887 | 0 | |
CACIAM-22H2 | order | 18 | 79,251 | 1,461 | 1,164 | |
CADEGL01 | order | 3 | 10,591 | 344 | 0 | |
CAISDR01 | order | 1 | 3,611 | 188 | 0 | |
CAISOG01 | order | 2 | 3,170 | 209 | 191 | |
CAIVPW01 | order | 5 | 12,153 | 327 | 342 | |
CAIYWZ01 | order | 1 | 1,697 | 353 | 0 | |
CAJWJK01 | order | 1 | 2,003 | 55 | 0 | |
CALTWN01 | order | 1 | 1,043 | 41 | 0 | |
Caedimonadales | order | 16 | 26,669 | 2,153 | 1,272 | |
Caulobacterales | order | 574 | 1,948,512 | 47,931 | 40,111 | |
DSM-16000 | order | 11 | 61,542 | 2,185 | 614 | |
Dongiales | order | 15 | 69,085 | 1,545 | 968 | |
Elsterales | order | 7 | 29,751 | 958 | 654 | |
Ferrovibrionales | order | 12 | 55,563 | 1,143 | 1,036 | |
G023898725 | order | 1 | 1,004 | 122 | 0 | |
G02398745 | order | 1 | 933 | 275 | 0 | |
GCA-002720895 | order | 7 | 6,154 | 106 | 43 | |
GCA-016699305 | order | 1 | 1,992 | 211 | 0 | |
GCA-2701885 | order | 3 | 5,396 | 109 | 40 | |
GCA-2721365 | order | 1 | 3,803 | 120 | 0 | |
GCA-2731375 | order | 8 | 36,850 | 448 | 632 | |
GCA-2746255 | order | 3 | 5,478 | 49 | 110 | |
GM7ARS4 | order | 2 | 3,228 | 251 | 0 | |
Geminicoccales | order | 20 | 78,326 | 2,100 | 1,705 | |
HIMB59 | order | 170 | 219,006 | 5,332 | 1,038 | |
Holosporales | order | 8 | 8,585 | 1,149 | 1,008 | |
JAAEOK01 | order | 1 | 4,249 | 130 | 0 | |
JAAXGF01 | order | 3 | 8,131 | 573 | 0 | |
JABSOH01 | order | 10 | 15,112 | 882 | 841 | |
JACAEB01 | order | 2 | 4,924 | 53 | 181 | |
JACQOE01 | order | 1 | 3,090 | 68 | 0 | |
JACZXZ01 | order | 1 | 2,230 | 89 | 0 | |
JAEUKQ01 | order | 3 | 5,420 | 223 | 263 | |
JAEULC01 | order | 5 | 24,239 | 449 | 428 | |
JAEULF01 | order | 1 | 4,310 | 208 | 0 | |
JAGOMX01 | order | 2 | 3,418 | 442 | 0 | |
JAGPBS01 | order | 1 | 1,785 | 240 | 0 | |
JAJFFI01 | order | 1 | 2,918 | 178 | 0 | |
JAJFIK01 | order | 2 | 6,722 | 75 | 427 | |
JAJTHO01 | order | 1 | 1,803 | 189 | 0 | |
JALRGP01 | order | 1 | 1,102 | 202 | 0 | |
JAMZFT01 | order | 1 | 3,190 | 104 | 0 | |
JANSWW01 | order | 1 | 3,640 | 146 | 0 | |
Kiloniellales | order | 38 | 163,317 | 3,587 | 2,476 | |
M2410 | order | 3 | 8,765 | 335 | 117 | |
MC1 | order | 1 | 1,657 | 153 | 0 | |
MED-G09 | order | 18 | 21,375 | 237 | 80 | |
MPNO01 | order | 24 | 79,655 | 888 | 1,225 | |
Micavibrionales | order | 126 | 270,539 | 11,708 | 13,295 | |
Micropepsales | order | 70 | 235,360 | 6,233 | 6,964 | |
Minwuiales | order | 4 | 17,001 | 258 | 279 | |
Oceanibaculales | order | 4 | 14,760 | 126 | 118 | |
Paracaedibacterales | order | 32 | 53,489 | 3,254 | 3,683 | |
Parvibaculales | order | 55 | 151,146 | 2,344 | 2,784 | |
Pelagibacterales | order | 1,192 | 1,236,524 | 13,030 | 4,410 | |
Puniceispirillales | order | 131 | 237,070 | 2,815 | 2,838 | |
RF32 | order | 260 | 384,422 | 16,483 | 10,136 | |
RUG11792 | order | 15 | 12,693 | 1,574 | 1,087 | |
Reyranellales | order | 62 | 367,710 | 8,152 | 5,252 | |
Rhizobiales | order | 2,368 | 11,882,377 | 267,995 | 214,362 | |
Rhizobiales_A | order | 8 | 9,084 | 326 | 684 | |
Rhodobacterales | order | 1,479 | 5,508,080 | 51,421 | 83,665 | |
Rhodospirillales | order | 113 | 416,458 | 8,467 | 7,643 | |
Rhodospirillales_A | order | 148 | 507,902 | 10,508 | 8,719 | |
Rickettsiales | order | 285 | 400,253 | 34,273 | 15,119 | |
Rickettsiales_A | order | 8 | 4,450 | 997 | 123 | |
Rs-D84 | order | 175 | 160,254 | 14,477 | 5,011 | |
SHNJ01 | order | 1 | 1,962 | 343 | 0 | |
SHVP01 | order | 3 | 9,200 | 173 | 191 | |
SHVR01 | order | 1 | 2,782 | 68 | 0 | |
SHVT01 | order | 2 | 4,064 | 57 | 71 | |
SHVV01 | order | 3 | 8,226 | 87 | 156 | |
SHVW01 | order | 2 | 8,957 | 47 | 192 | |
SHVZ01 | order | 7 | 31,445 | 503 | 329 | |
SHWA01 | order | 1 | 2,270 | 53 | 0 | |
SMXP01 | order | 3 | 8,266 | 191 | 205 | |
SMXQ01 | order | 8 | 22,623 | 274 | 374 | |
SMXS01 | order | 5 | 15,898 | 384 | 234 | |
SP197 | order | 8 | 29,410 | 446 | 903 | |
SPJN01 | order | 1 | 1,921 | 69 | 0 | |
Sneathiellales | order | 24 | 83,630 | 1,501 | 1,262 | |
Sphingomonadales | order | 1,183 | 4,061,230 | 54,692 | 62,702 | |
TMED109 | order | 8 | 12,322 | 136 | 102 | |
TMED109_A | order | 14 | 18,379 | 174 | 113 | |
TMED127 | order | 39 | 51,629 | 601 | 330 | |
TMED2 | order | 2 | 6,077 | 325 | 288 | |
TMED25 | order | 12 | 15,870 | 190 | 114 | |
Thalassobaculales | order | 31 | 107,615 | 1,535 | 1,459 | |
Tistrellales | order | 2 | 10,925 | 141 | 217 | |
UBA11073 | order | 2 | 3,036 | 51 | 489 | |
UBA11136 | order | 3 | 6,194 | 113 | 137 | |
UBA11222 | order | 3 | 8,454 | 87 | 399 | |
UBA1247 | order | 1 | 1,618 | 174 | 0 | |
UBA1280 | order | 16 | 24,368 | 1,820 | 2,263 | |
UBA2400 | order | 1 | 2,095 | 373 | 0 | |
UBA2562 | order | 1 | 3,085 | 360 | 0 | |
UBA2966 | order | 5 | 22,024 | 272 | 618 | |
UBA3830 | order | 15 | 16,476 | 1,069 | 854 | |
UBA6184 | order | 3 | 3,291 | 352 | 290 | |
UBA6615 | order | 17 | 50,551 | 685 | 646 | |
UBA7879 | order | 9 | 10,920 | 811 | 629 | |
UBA7887 | order | 8 | 19,135 | 383 | 430 | |
UBA7985 | order | 8 | 20,928 | 798 | 562 | |
UBA828 | order | 16 | 50,380 | 409 | 737 | |
UBA8317 | order | 1 | 1,730 | 94 | 0 | |
UBA8366 | order | 35 | 140,933 | 2,360 | 2,475 | |
UBA8558 | order | 1 | 1,233 | 19 | 0 | |
UBA9219 | order | 21 | 41,663 | 2,502 | 1,953 | |
UBA9655 | order | 17 | 31,486 | 1,914 | 1,281 | |
VGDZ01 | order | 1 | 3,702 | 114 | 0 | |
VGEJ01 | order | 1 | 3,154 | 127 | 0 | |
VXPW01 | order | 6 | 18,995 | 336 | 712 | |
WRAU01 | order | 2 | 2,223 | 300 | 0 | |
Zavarziniales | order | 5 | 21,154 | 391 | 376 |