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Hierarchical exploration of TRG genes through taxonomy of Bacteria

Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
AU392 genus 1 3,047 31 0
Abyssalbus genus 1 3,695 130 0
Aegicerativicinus genus 2 6,886 2 133
Aequorivita genus 23 69,774 385 1,011
Aestuariibaculum genus 4 13,539 12 154
Aestuariivivens genus 4 12,846 25 241
Aggregatimonas genus 1 4,030 140 0
Algibacter genus 4 15,106 23 107
Algibacter_A genus 1 3,342 32 0
Algibacter_B genus 4 12,306 6 86
Algibacter_C genus 1 4,020 95 0
Algibacter_D genus 1 2,835 21 0
Algibacter_E genus 1 3,720 55 0
Algorimicrobium genus 6 18,734 38 344
Altibacter genus 4 11,438 16 203
Aquaticitalea genus 5 15,696 9 235
Aquimarina genus 34 153,734 3,894 3,413
Arcticimaribacter genus 14 25,013 195 418
Arenibacter genus 19 81,931 729 2,012
Arenitalea genus 1 2,962 13 0
Aurantibacter genus 1 2,636 34 0
Aurantibacter_A genus 3 11,880 14 316
Aureibaculum genus 12 37,687 239 673
Aureicoccus genus 1 2,953 75 0
Aureitalea genus 1 2,894 57 0
Aureivirga genus 2 7,824 106 239
BACL21 genus 6 11,080 51 326
Bin25 genus 1 2,571 374 0
Bizionia genus 3 8,468 14 98
BrNp1-15 genus 1 3,141 16 0
CAJQLB01 genus 2 5,180 1 63
CAJXUB01 genus 1 1,662 7 0
CAJXVU01 genus 1 3,413 72 0
CG1-02-35-72 genus 3 6,789 22 95
Capnocytophaga genus 18 43,451 1,317 1,065
Cellulophaga genus 14 51,174 322 410
Changchengzhania genus 1 3,726 83 0
Cochleicola genus 1 3,060 47 0
Confluentibacter genus 6 18,639 40 253
Constantimarinum genus 1 2,718 38 0
Costertonia genus 1 3,635 94 0
Croceibacter genus 1 2,680 26 0
Croceitalea genus 2 6,069 1 133
Croceivirga genus 6 22,293 125 495
DFVG01 genus 1 2,694 34 0
DJVA01 genus 1 2,692 42 0
DT-32 genus 1 3,302 54 0
DT-33 genus 1 2,851 171 0
DT-34 genus 1 2,888 99 0
DT-35 genus 1 3,564 203 0
Dokdonia genus 12 36,132 278 547
Eudoraea genus 5 14,601 71 210
Euzebyella genus 3 12,116 76 147
Flavicella genus 4 9,607 17 172
Flaviramulus genus 1 3,673 34 0
Flavivirga genus 3 13,083 17 248
Flavobacterium genus 485 1,623,206 36,110 24,384
Formosa genus 5 17,740 39 135
GCA-002401385 genus 4 10,024 83 261
GCA-002728855 genus 2 2,877 7 21
GCA-002733185 genus 17 40,384 138 1,127
GCA-2700405 genus 6 7,011 23 40
GCA-2719315 genus 2 3,107 10 18
GCA-2733415 genus 4 11,400 85 390
GCA-2747695 genus 7 14,065 47 305
GCA-2862715 genus 1 1,324 9 0
GCA001735715 genus 1 1,817 15 0
GSB9 genus 1 3,178 39 0
Gaetbulibacter genus 1 2,676 28 0
Galbibacter genus 2 6,433 16 107
Galbibacter_B genus 1 3,183 78 0
Gelidibacter genus 9 34,772 149 1,000
Gillisia genus 16 51,527 203 968
Gilvibacter genus 3 8,246 43 161
Gramella genus 23 73,338 445 920
HDS-28 genus 1 2,554 51 0
HKST-UBA85 genus 1 2,771 28 0
Halomarinibacterium genus 3 8,113 9 67
Hanstruepera genus 4 11,565 32 77
Hel1-33-131 genus 10 18,752 58 304
Ichthyenterobacterium genus 1 2,763 18 0
Imtechella genus 1 2,730 48 0
JAADHG01 genus 1 2,540 33 0
JAAYLC01 genus 1 2,728 117 0
JABABD01 genus 2 6,240 7 91
JABDMV01 genus 1 2,556 15 0
JABDRK01 genus 2 5,561 12 79
JADNYK01 genus 2 8,035 35 112
JAGSHF01 genus 1 2,870 32 0
JAGXRT01 genus 2 4,242 11 50
JAHDGB01 genus 1 2,631 101 0
JAHDHI01 genus 1 3,901 171 0
JAHEJJ01 genus 1 2,820 57 0
JAHEMY01 genus 1 2,670 26 0
JAHEMZ01 genus 1 2,529 33 0
JAHENB01 genus 1 3,340 106 0
JAIOUW01 genus 1 3,439 84 0
JAJYSO01 genus 2 4,263 5 83
JAJYTI01 genus 1 2,108 58 0
JALHST01 genus 1 3,782 116 0
JALRJA01 genus 1 2,138 36 0
JALRKI01 genus 1 1,171 25 0
JAMJVX01 genus 1 1,408 48 0
Jejuia genus 7 23,574 40 263
Joostella genus 2 7,343 4 95
Kordia genus 9 40,184 1,811 1,107
Kriegella genus 1 5,019 168 0
Lacinutrix genus 9 28,222 80 254
Leeuwenhoekiella genus 13 48,423 425 655
Leptobacterium genus 2 7,424 21 155
Luteirhabdus genus 1 3,125 63 0
Lutibacter genus 30 89,180 436 1,260
Lutimonas genus 11 30,367 184 658
MAAR01 genus 1 2,774 20 0
MAG-120531 genus 9 15,584 74 211
MAG-121220-bin8 genus 19 26,749 131 163
MED-G13 genus 22 25,565 137 127
MED-G14 genus 26 29,118 216 124
MS024-2A genus 34 56,017 486 597
Mangrovimonas genus 3 8,122 7 58
Mangrovimonas_A genus 2 6,982 31 117
Maribacter genus 25 95,266 625 1,396
Maribacter_A genus 11 41,511 169 1,169
Maribacter_B genus 2 6,704 6 102
Maribacter_C genus 3 9,415 8 304
Mariniflexile genus 4 14,981 4 267
Marinirhabdus genus 5 14,855 37 233
Marisimplicoccus genus 28 29,225 247 100
Marivariicella genus 6 9,150 62 78
Marixanthomonas genus 7 19,741 69 181
MedPE-SWsnd-G2 genus 1 2,715 31 0
Meridianimaribacter genus 1 2,874 15 0
Mesoflavibacter genus 2 5,460 5 20
Mesonia genus 11 32,802 186 455
Mesonia_A genus 1 2,364 32 0
Muricauda genus 55 199,954 1,778 3,453
Muricauda_A genus 3 9,303 5 153
Muriicola genus 8 21,447 72 310
NORP215 genus 1 1,721 49 0
NZQO01 genus 1 2,174 40 0
Nonlabens genus 21 61,874 1,363 1,142
Oceanihabitans genus 5 16,221 29 114
Ochrovirga genus 1 2,864 44 0
Olleya genus 8 25,184 81 179
PALG01 genus 1 2,848 35 0
PRS1 genus 5 12,614 24 215
Pareuzebyella genus 1 4,197 151 0
Patiriisocius genus 9 20,151 73 224
Paucihalobacter genus 2 5,565 10 79
Pelagihabitans genus 1 4,068 107 0
Planktosalinus genus 5 13,185 47 211
Polaribacter genus 59 171,512 824 1,946
Polaribacter_A genus 6 14,322 18 171
Pontimicrobium genus 4 11,846 15 104
Poritiphilus genus 1 4,225 100 0
Pricia genus 3 12,792 20 586
Pseudozobellia genus 1 4,216 75 0
Psychroflexus genus 26 69,130 710 1,281
Psychroserpens genus 18 62,108 85 855
Pukyongia genus 4 11,808 81 128
Pustulibacterium genus 1 3,726 107 0
QXCW01 genus 1 2,986 30 0
RFYP01 genus 3 5,081 20 67
Robertkochia genus 5 15,912 84 362
Robiginitalea genus 7 20,350 59 278
S010-17 genus 2 4,365 4 127
SCGC-AAA160-P02 genus 9 21,712 45 653
SGZJ01 genus 5 6,880 14 32
SHLJ01 genus 5 13,373 42 178
SMXJ01 genus 7 19,020 45 368
SP29 genus 1 1,494 12 0
Sabulilitoribacter genus 1 2,920 17 0
Salegentibacter genus 17 56,194 298 701
Salinimicrobium genus 8 25,142 180 450
Saonia genus 2 6,840 0 154
Sediminicola genus 2 7,314 0 253
Sediminicola_A genus 1 3,820 87 0
Seonamhaeicola genus 6 19,115 19 181
Siansivirga genus 1 2,869 28 0
Sinomicrobium genus 5 21,601 200 708
Site-B1 genus 1 2,170 40 0
Site-B15 genus 1 2,513 60 0
Snuella genus 1 3,534 54 0
Spongiivirga genus 1 3,651 63 0
TMED220 genus 4 5,286 15 69
TMED96 genus 8 11,336 80 90
Tamlana_A genus 5 16,375 46 216
Tamlana_B genus 4 13,177 28 91
Tamlana_C genus 2 6,433 0 56
Tenacibaculum genus 32 102,329 1,138 1,789
Tenacibaculum_A genus 2 5,321 7 31
UBA11891 genus 3 5,001 22 67
UBA3478 genus 13 21,321 264 193
UBA3537 genus 7 9,442 35 159
UBA724 genus 12 14,912 120 139
UBA7446 genus 10 14,066 82 151
UBA8316 genus 24 39,150 254 698
UM-FILTER-40-17 genus 3 7,824 34 301
Ulvibacter genus 3 10,027 8 190
Ulvibacter_A genus 1 2,626 58 0
Ulvibacterium genus 1 5,144 161 0
Urechidicola genus 10 23,696 83 370
VISM01 genus 1 2,683 38 0
WTJH01 genus 1 1,946 61 0
Wenyingzhuangia genus 5 12,845 77 136
Winogradskyella genus 58 184,040 593 1,780
Wocania genus 4 12,857 2 163
Xanthomarina genus 6 17,448 30 149
Yeosuana genus 7 22,159 31 371
Zeaxanthinibacter genus 3 8,900 17 175
Zhouia genus 2 6,729 22 111
Zobellia genus 9 38,022 268 478
Zunongwangia genus 4 16,637 142 234