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Hierarchical exploration of TRG genes through taxonomy of Bacteria

Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
Pedobacter africanus species 1 4,771 95 101
Pedobacter agri species 1 5,061 201 160
Pedobacter alluvionis species 1 5,091 171 99
Pedobacter antarcticus species 1 4,137 80 89
Pedobacter borealis species 1 4,813 184 109
Pedobacter boryungensis species 1 3,136 57 36
Pedobacter caeni species 1 6,736 108 112
Pedobacter changchengzhani species 1 3,435 45 91
Pedobacter chinensis species 1 4,714 110 136
Pedobacter chitinilyticus species 1 4,197 69 83
Pedobacter cryoconitis species 1 5,288 151 87
Pedobacter cryoconitis_A species 1 5,086 151 98
Pedobacter cryoconitis_B species 1 5,301 125 84
Pedobacter cryoconitis_C species 1 5,459 135 86
Pedobacter cryoconitis_D species 1 5,153 88 73
Pedobacter cryoconitis_E species 1 4,350 76 86
Pedobacter cryotolerans species 1 3,770 72 67
Pedobacter duraquae species 1 4,686 79 138
Pedobacter endophyticus species 1 4,582 125 219
Pedobacter fastidiosus species 1 4,595 125 110
Pedobacter foliorum species 1 5,072 103 59
Pedobacter frigidisoli species 1 4,630 142 135
Pedobacter frigiditerrae species 1 4,827 79 89
Pedobacter frigoris species 1 4,124 63 84
Pedobacter gandavensis species 1 4,756 93 110
Pedobacter ghigonis species 1 4,893 130 80
Pedobacter ginsengisoli species 1 4,561 89 69
Pedobacter ginsenosidimutans species 1 5,462 169 100
Pedobacter hartonius species 1 4,639 111 148
Pedobacter helvus species 1 4,023 87 77
Pedobacter heparinus species 1 4,272 74 56
Pedobacter hiemivivus species 1 5,481 102 110
Pedobacter insulae species 1 3,779 47 52
Pedobacter jejuensis species 1 4,093 111 67
Pedobacter jeongneungensis species 1 5,798 219 153
Pedobacter kyonggii species 1 5,249 182 95
Pedobacter kyungheensis species 1 5,308 171 58
Pedobacter lusitanus species 1 5,459 119 97
Pedobacter mendelii species 1 3,941 118 86
Pedobacter metabolipauper species 1 4,586 75 105
Pedobacter miscanthi species 1 5,681 181 130
Pedobacter mucosus species 1 4,195 90 96
Pedobacter namyangjuensis species 1 3,795 74 73
Pedobacter nanyangensis species 1 4,001 64 114
Pedobacter nototheniae species 1 4,599 112 103
Pedobacter nutrimenti species 1 4,948 65 115
Pedobacter nyackensis species 1 5,002 87 98
Pedobacter paludis species 1 4,383 115 80
Pedobacter panaciterrae species 1 5,374 118 62
Pedobacter panaciterrae_A species 1 5,620 118 170
Pedobacter petrophilus species 1 4,794 138 124
Pedobacter planticolens species 1 3,493 50 49
Pedobacter polaris species 1 3,960 75 76
Pedobacter psychrodurus species 1 5,105 152 113
Pedobacter psychroterrae species 1 4,331 61 73
Pedobacter psychrotolerans species 1 4,405 137 91
Pedobacter quisquiliarum species 1 3,384 68 61
Pedobacter rhizosphaerae species 1 4,874 116 173
Pedobacter roseus species 1 5,370 170 91
Pedobacter schmidteae species 1 5,005 75 87
Pedobacter soli species 1 5,013 149 58
Pedobacter sp000170795 species 1 4,935 79 123
Pedobacter sp000523515 species 1 5,742 145 91
Pedobacter sp000708265 species 1 4,296 118 80
Pedobacter sp001027745 species 1 4,308 131 95
Pedobacter sp001412215 species 1 4,379 75 79
Pedobacter sp001412655 species 1 5,223 142 75
Pedobacter sp001421515 species 1 4,857 152 101
Pedobacter sp001422545 species 1 4,167 128 102
Pedobacter sp001423945 species 1 4,014 129 79
Pedobacter sp001424305 species 1 4,167 123 100
Pedobacter sp002151545 species 1 5,045 137 81
Pedobacter sp002197755 species 1 4,210 121 81
Pedobacter sp002320935 species 1 3,700 71 87
Pedobacter sp002333205 species 1 3,728 79 86
Pedobacter sp002336465 species 1 2,593 49 42
Pedobacter sp002399615 species 1 3,150 48 73
Pedobacter sp002432345 species 1 5,408 130 118
Pedobacter sp003061025 species 1 5,964 142 128
Pedobacter sp003852395 species 1 5,502 152 91
Pedobacter sp003852525 species 1 6,692 143 119
Pedobacter sp004138205 species 1 3,950 78 124
Pedobacter sp004210715 species 1 4,374 165 66
Pedobacter sp004211595 species 1 2,438 18 80
Pedobacter sp004295885 species 1 4,701 127 94
Pedobacter sp005938645 species 1 5,316 182 124
Pedobacter sp009765875 species 1 5,614 110 171
Pedobacter sp011759615 species 1 5,031 156 57
Pedobacter sp014205835 species 1 5,130 163 112
Pedobacter sp014302835 species 1 4,212 81 72
Pedobacter sp014377665 species 1 2,902 51 66
Pedobacter sp014377775 species 1 3,044 39 47
Pedobacter sp014472395 species 1 4,567 126 86
Pedobacter sp015223055 species 1 5,701 115 117
Pedobacter sp015655115 species 1 4,203 67 143
Pedobacter sp016428855 species 1 4,600 66 180
Pedobacter sp016429005 species 1 6,403 164 329
Pedobacter sp016429065 species 1 5,206 118 471
Pedobacter sp016429155 species 1 4,252 74 197
Pedobacter sp017745075 species 1 4,917 141 123
Pedobacter sp018492665 species 1 4,751 87 83
Pedobacter sp018613605 species 1 5,508 187 122
Pedobacter sp019317285 species 1 4,899 176 103
Pedobacter sp019751895 species 1 2,285 6 119
Pedobacter sp019752795 species 1 2,210 35 22
Pedobacter sp019802255 species 1 4,875 105 54
Pedobacter sp020991475 species 1 4,153 47 69
Pedobacter sp022809115 species 1 2,890 38 22
Pedobacter sp023450085 species 1 4,890 101 100
Pedobacter sp024436415 species 1 3,551 57 80
Pedobacter sp900100435 species 1 5,517 107 100
Pedobacter sp913776295 species 1 4,330 150 94
Pedobacter sp918698245 species 1 5,199 183 83
Pedobacter sp920984665 species 1 3,888 123 89
Pedobacter sp920984735 species 1 4,169 119 82
Pedobacter steynii species 1 6,677 135 124
Pedobacter steynii_A species 1 5,478 97 97
Pedobacter suwonensis species 1 4,933 158 137
Pedobacter terrae species 1 4,970 169 143
Pedobacter ureilyticus species 1 4,248 57 108
Pedobacter westerhofensis species 1 5,681 147 179
Pedobacter xixiisoli species 1 4,201 66 84
Pedobacter yonginense species 1 3,800 105 84
Pedobacter yulinensis species 1 3,833 72 88
Pedobacter zeae species 1 4,620 139 110
Pedobacter zeaxanthinifaciens species 1 3,654 55 81