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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
Methylobacterium adhaesivum species 1 4,366 253 60
Methylobacterium aerolatum species 1 4,480 287 66
Methylobacterium ajmalii species 1 6,435 439 84
Methylobacterium aminovorans species 1 5,757 481 133
Methylobacterium aquaticum species 1 6,961 425 142
Methylobacterium aquaticum_C species 1 6,801 414 107
Methylobacterium brachiatum species 1 6,316 499 72
Methylobacterium brachythecii species 1 5,108 376 92
Methylobacterium bullatum species 1 4,730 313 57
Methylobacterium cerastii species 1 5,189 416 97
Methylobacterium crusticola species 1 7,079 341 216
Methylobacterium currus species 1 7,129 439 101
Methylobacterium dankookense species 1 5,932 471 111
Methylobacterium durans species 1 6,791 654 208
Methylobacterium extorquens species 1 5,433 454 91
Methylobacterium extorquens_A species 1 4,878 373 51
Methylobacterium frigidaeris species 1 7,540 461 142
Methylobacterium fujisawaense species 1 5,571 429 69
Methylobacterium gnaphalii species 1 4,736 379 164
Methylobacterium goesingense species 1 5,140 393 61
Methylobacterium gossipiicola species 1 4,226 248 37
Methylobacterium gregans species 1 5,489 459 94
Methylobacterium haplocladii species 1 4,390 310 103
Methylobacterium hispanicum species 1 6,399 548 275
Methylobacterium indicum species 1 6,549 378 75
Methylobacterium iners species 1 5,349 359 232
Methylobacterium isbiliense species 1 6,694 368 151
Methylobacterium jeotgali species 1 4,334 276 93
Methylobacterium longum species 1 6,525 694 141
Methylobacterium marchantiae species 1 4,304 246 55
Methylobacterium mesophilicum species 1 5,700 487 50
Methylobacterium mesophilicum_A species 1 6,342 593 134
Methylobacterium nodulans species 1 8,636 524 518
Methylobacterium nonmethylotrophicum species 1 7,083 376 96
Methylobacterium organophilum species 1 4,752 283 96
Methylobacterium oryzihabitans species 1 5,779 217 95
Methylobacterium oxalidis species 1 6,212 645 145
Methylobacterium persicinum species 1 4,925 342 67
Methylobacterium phyllostachyos species 1 5,792 535 84
Methylobacterium platani species 1 6,490 419 84
Methylobacterium podarium species 1 5,294 397 80
Methylobacterium populi_A species 1 5,536 412 57
Methylobacterium populi_B species 1 4,305 280 25
Methylobacterium pseudosasicola species 1 6,799 638 112
Methylobacterium radiodurans species 1 5,177 377 81
Methylobacterium radiotolerans species 1 6,504 579 63
Methylobacterium rhodesianum species 1 5,483 455 55
Methylobacterium rhodinum species 1 5,021 355 76
Methylobacterium salsuginis species 1 5,044 353 55
Methylobacterium segetis species 1 5,437 438 101
Methylobacterium soli species 1 6,482 575 223
Methylobacterium sp000372825 species 1 4,270 251 44
Methylobacterium sp000379105 species 1 7,081 388 309
Methylobacterium sp000519085 species 1 4,607 285 54
Methylobacterium sp001422375 species 1 4,351 277 37
Methylobacterium sp001422815 species 1 4,961 313 97
Methylobacterium sp001422885 species 1 4,648 340 39
Methylobacterium sp001422985 species 1 4,966 354 77
Methylobacterium sp001423085 species 1 5,090 381 78
Methylobacterium sp001423265 species 1 4,098 211 49
Methylobacterium sp001423295 species 1 4,444 260 51
Methylobacterium sp001423405 species 1 5,037 341 71
Methylobacterium sp001424705 species 1 4,703 314 38
Methylobacterium sp001425465 species 1 5,295 421 87
Methylobacterium sp001455965 species 1 5,596 468 69
Methylobacterium sp001542815 species 1 5,093 357 90
Methylobacterium sp003173775 species 1 5,886 308 43
Methylobacterium sp003201865 species 1 4,802 359 70
Methylobacterium sp008000895 species 1 6,107 603 109
Methylobacterium sp008039875 species 1 5,727 506 142
Methylobacterium sp008806345 species 1 5,577 465 151
Methylobacterium sp009806555 species 1 6,055 474 69
Methylobacterium sp010692745 species 1 4,954 313 116
Methylobacterium sp011043735 species 1 6,936 429 59
Methylobacterium sp014191355 species 1 5,501 468 123
Methylobacterium sp017833295 species 1 6,061 500 108
Methylobacterium sp019216885 species 1 6,674 352 73
Methylobacterium sp019745455 species 1 5,341 315 172
Methylobacterium sp020662345 species 1 5,200 393 75
Methylobacterium sp021117295 species 1 5,027 391 43
Methylobacterium sp021352225 species 1 5,027 365 108
Methylobacterium sp022702015 species 1 4,668 343 72
Methylobacterium sp022702195 species 1 3,871 207 45
Methylobacterium sp022829285 species 1 5,300 413 46
Methylobacterium sp022829295 species 1 6,361 653 117
Methylobacterium sp022829345 species 1 4,838 312 63
Methylobacterium sp022829365 species 1 6,595 602 94
Methylobacterium sp022829385 species 1 7,149 741 143
Methylobacterium sp022829405 species 1 4,993 386 73
Methylobacterium sp022829445 species 1 4,826 341 56
Methylobacterium sp022829465 species 1 5,283 427 57
Methylobacterium sp022829515 species 1 6,416 668 95
Methylobacterium sp022829545 species 1 7,233 779 202
Methylobacterium sp022829585 species 1 6,226 652 103
Methylobacterium sp022829605 species 1 7,195 837 174
Methylobacterium sp022829635 species 1 6,571 643 73
Methylobacterium sp022829685 species 1 5,432 417 98
Methylobacterium sp022829725 species 1 6,803 712 179
Methylobacterium sp023386115 species 1 7,202 443 127
Methylobacterium sp023422485 species 1 4,204 288 49
Methylobacterium sp900103195 species 1 6,110 520 89
Methylobacterium sp900112625 species 1 6,332 558 83
Methylobacterium sp920984675 species 1 4,768 377 66
Methylobacterium suomiense species 1 5,274 434 118
Methylobacterium symbioticum species 1 5,858 447 112
Methylobacterium tardum species 1 6,811 677 146
Methylobacterium tarhaniae species 1 6,348 345 75
Methylobacterium terrae species 1 5,627 317 45
Methylobacterium terricola species 1 7,278 441 118
Methylobacterium thiocyanatum species 1 5,270 396 44
Methylobacterium thuringiense species 1 4,425 336 84
Methylobacterium trifolii species 1 5,071 303 119
Methylobacterium variabile species 1 7,204 456 110
Methylobacterium zatmanii species 1 5,014 364 64