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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
Acutalibacter genus 36 96,568 1,525 1,302
Anaeromassilibacillus genus 4 12,178 175 255
Avimonas genus 12 27,267 235 753
Avimonas_A genus 3 6,217 41 177
CAG-177 genus 52 101,872 1,946 1,203
CAG-217 genus 2 3,619 6 68
CAG-488 genus 25 49,452 952 569
CAG-557 genus 6 7,299 169 259
CAG-964 genus 7 13,324 250 243
CAJFUH01 genus 3 6,138 92 195
CAKRRH01 genus 1 1,725 70 0
CAKSCM01 genus 1 1,688 52 0
CAKSIH01 genus 1 1,418 125 0
CAKSJY01 genus 3 3,977 100 73
CAKSKO01 genus 1 1,719 105 0
CAKSSR01 genus 1 1,908 476 0
CAKSST01 genus 1 1,707 37 0
CAKTEE01 genus 1 2,255 109 0
CAKTXU01 genus 2 4,926 8 175
CAKXIK01 genus 2 4,545 47 137
CALWKP01 genus 2 3,904 6 83
CALWPT01 genus 1 1,628 53 0
CALWVF01 genus 1 1,411 104 0
CALYOC01 genus 1 1,127 26 0
Caccousia genus 7 17,323 102 227
Caproicibacter genus 19 40,947 299 1,007
Caproicibacterium genus 10 20,363 259 469
Caproiciproducens genus 17 44,583 299 725
Clostridium_A genus 1 2,917 81 0
Clostridium_E genus 6 18,124 205 305
DTU053 genus 3 5,694 53 169
DTU089 genus 23 45,042 987 573
DULI01 genus 1 1,740 36 0
DXWE01 genus 1 1,903 82 0
Eubacterium_R genus 84 150,978 2,704 2,006
Fimenecus genus 36 65,468 1,170 897
Fimivicinus genus 5 10,896 279 276
Gallacutalibacter genus 2 4,475 28 77
Gallacutalibacter_A genus 1 2,693 86 0
HGM12789 genus 3 5,997 60 72
HGM12814 genus 3 7,353 29 491
Heritagella genus 11 26,075 308 510
Howiella genus 4 7,363 73 171
Hydrogeniiclostridium genus 1 2,813 91 0
JAAZFZ01 genus 2 4,100 0 108
JAEEHZ01 genus 3 5,499 118 155
JAEWYE01 genus 1 3,271 95 0
JAGZMM01 genus 2 4,147 49 62
JAHZIE01 genus 1 2,546 150 0
JAILDS01 genus 1 2,159 92 0
Limousia genus 2 4,238 48 50
MKRK01 genus 1 3,135 234 0
Onthovicinus genus 2 4,018 51 88
Pseudoruminococcus genus 2 4,426 49 78
RGIG1913 genus 3 2,832 10 85
RGIG1959 genus 4 6,633 83 157
RGIG2202 genus 1 1,532 33 0
RGIG2206 genus 2 2,793 5 76
RGIG2774 genus 5 13,047 205 318
RGIG2835 genus 1 2,166 95 0
RGIG2893 genus 2 3,891 3 118
RGIG2945 genus 1 1,808 46 0
RGIG3009 genus 9 13,541 90 190
RGIG3013 genus 1 1,258 18 0
RGIG3926 genus 1 1,194 30 0
RGIG4076 genus 3 6,666 32 264
RGIG426 genus 6 8,992 110 165
RGIG6098 genus 1 1,646 38 0
RGIG7067 genus 2 3,527 18 105
RGIG7265 genus 2 4,292 60 109
RGIG7273 genus 1 1,856 84 0
RGIG7384 genus 2 2,588 6 122
RGIG9287 genus 2 1,778 243 209
RUG11462 genus 5 8,955 140 190
RUG14109 genus 4 6,237 65 162
RUG14215 genus 2 2,714 11 283
RUG14223 genus 1 1,819 95 0
RUG420 genus 11 19,257 457 294
RUG592 genus 21 42,180 1,207 1,021
RUG612 genus 2 3,954 43 70
RUG714 genus 7 13,272 417 271
RUG762 genus 12 29,138 1,172 411
RUG806 genus 23 54,526 1,043 990
RZYX01 genus 2 4,241 26 160
Ruminococcus_E genus 143 266,501 6,411 3,454
SFWF01 genus 11 13,117 65 162
SIG554 genus 2 3,288 22 16
SIG565 genus 6 8,895 53 105
SIG575 genus 8 13,930 172 173
SIG587 genus 2 2,694 18 11
SIG588 genus 2 3,485 32 47
SIG589 genus 3 4,163 31 66
SIG598 genus 4 8,424 170 265
SIG603 genus 2 4,636 130 61
SIG607 genus 6 10,028 61 184
Scatavimonas genus 4 8,648 133 144
Scatolibacter genus 3 6,677 29 186
Scybalenecus genus 3 5,331 41 69
Solibaculum genus 2 4,174 44 79
Timburyella genus 3 5,017 111 157
UBA1081 genus 14 29,122 552 537
UBA1213 genus 54 112,075 3,461 2,659
UBA1227 genus 10 13,555 234 255
UBA1417 genus 9 20,182 246 260
UBA1425 genus 9 20,249 360 341
UBA1447 genus 4 8,321 43 203
UBA3753 genus 1 1,157 257 0
UBA3903 genus 1 1,689 44 0
UBA5905 genus 21 35,066 413 494
UBA6857 genus 44 89,256 2,509 1,278
UBA7067 genus 2 3,486 20 45
UBA737 genus 99 152,909 1,526 1,688
UBA8129 genus 1 2,197 150 0
UBA8612 genus 11 24,819 412 269
UMGS1071 genus 11 18,254 276 413
UMGS1224 genus 2 2,089 12 118
UMGS1264 genus 4 9,601 87 239
UMGS1279 genus 12 18,584 181 378
UMGS1474 genus 2 3,857 25 79
UMGS1484 genus 9 14,602 233 253
UMGS1487 genus 1 1,755 47 0
UMGS1491 genus 22 24,283 1,574 1,510
UMGS1532 genus 2 3,565 29 157
UMGS1591 genus 2 4,888 41 104
UMGS1623 genus 3 6,066 40 238
UMGS172 genus 5 8,939 94 175
UMGS1858 genus 2 3,424 11 127
UMGS1976 genus 7 10,152 252 153
UMGS263 genus 2 4,028 2 108
UMGS856 genus 2 5,505 6 128
WRDE01 genus 1 2,107 123 0
WRKY01 genus 1 1,458 114 0
WRMQ01 genus 6 13,325 616 691
Yeguia genus 1 2,878 134 0