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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
188UL27-1 genus 1 4,661 175 0
3107 genus 1 2,081 73 0
ASV31 genus 1 3,564 45 0
AWRV01 genus 2 9,288 63 72
Acidimangrovimonas genus 3 13,157 87 185
Actibacterium genus 2 6,870 2 115
Actibacterium_A genus 2 7,754 3 93
Actibacterium_B genus 1 3,373 72 0
Actibacterium_C genus 1 4,070 59 0
Aestuariicoccus genus 1 4,457 53 0
Aestuariivita genus 2 8,685 3 193
Albibacillus genus 1 5,221 52 0
Albidovulum genus 15 54,019 311 648
Albimonas genus 2 9,581 59 337
Alexandriicola genus 1 4,591 80 0
Aliiroseovarius genus 15 49,804 322 781
Aliishimia genus 1 3,893 63 0
Allosediminivita genus 1 4,627 59 0
Alterinioella genus 1 4,042 45 0
Amaricoccus genus 7 28,466 230 662
Amylibacter genus 25 76,735 658 2,055
Antarcticimicrobium genus 2 8,752 6 88
Antarctobacter genus 2 10,337 27 132
Aquicoccus genus 3 10,879 22 97
Aquimixticola genus 1 3,341 63 0
Arenibacterium genus 1 4,390 44 0
Arenibacterium_A genus 1 3,841 37 0
Ascidiaceihabitans genus 7 20,234 103 377
Bieblia_A genus 1 3,260 41 0
Boseongicola genus 5 17,344 153 495
Brevirhabdus genus 1 3,217 52 0
CABZJG01 genus 3 6,606 45 231
CACIIZ01 genus 11 18,579 302 220
CACIJG01 genus 23 41,379 1,191 333
CACKLF01 genus 2 3,420 19 67
CAIYZT01 genus 1 4,014 95 0
CAJXSO01 genus 2 6,588 44 283
CAJXWO01 genus 1 2,830 28 0
CAJXYS01 genus 1 3,164 38 0
CAMBWO01 genus 1 4,777 76 0
CAU-1522 genus 1 3,616 33 0
CCMM004 genus 1 4,219 82 0
CPC320 genus 2 6,133 57 253
Carideicomes genus 1 5,539 114 0
Celeribacter genus 12 49,514 389 645
Celeribacter_A genus 1 3,100 62 0
Cereibacter genus 1 4,934 116 0
Cereibacter_A genus 5 19,617 235 230
Chachezhania genus 2 9,834 21 140
Citreimonas genus 1 4,120 105 0
Cochlodiniinecator genus 1 3,680 94 0
Cognatishimia genus 4 13,663 69 337
Cognatiyoonia genus 2 6,904 3 154
Cribrihabitans genus 1 4,014 42 0
Cypionkella genus 13 46,226 175 736
DP3N28-2 genus 1 4,942 56 0
Dinoroseobacter genus 3 10,812 17 255
Donghicola genus 3 12,876 85 178
EhC02 genus 6 22,012 69 265
Epibacterium genus 14 55,643 300 1,025
FREY01 genus 2 8,760 24 141
Falsihalocynthiibacter genus 1 4,479 158 0
Falsirhodobacter genus 5 15,758 70 305
Falsiruegeria genus 4 19,095 62 239
Fertoeibacter genus 1 4,131 64 0
Flavimaricola genus 1 4,589 66 0
Frigidibacter genus 4 15,976 45 190
Fuscibacter genus 4 15,452 64 180
Fuscovulum genus 2 7,339 7 78
G019454225 genus 1 3,909 56 0
G020447305 genus 1 3,123 45 0
GCA-002705045 genus 1 2,198 62 0
GCA-002712045 genus 3 6,804 35 66
GCA-004216475 genus 1 4,859 104 0
GCA-2697345 genus 3 6,840 66 228
GCA-2747035 genus 1 2,499 76 0
GCA-2747325 genus 1 1,950 46 0
GCA-2748265 genus 1 2,855 60 0
Gemmobacter genus 10 41,402 174 608
Gemmobacter_B genus 12 45,930 452 630
Gemmobacter_C genus 1 3,584 78 0
Gemmobacter_D genus 1 3,530 30 0
Gymnodinialimonas genus 7 26,844 315 507
HIMB11 genus 7 19,140 256 354
HKCCE3408 genus 2 8,231 20 182
HLUCCA09 genus 3 11,862 118 206
HTCC2150 genus 1 3,534 100 0
HXMU1420-2 genus 1 4,376 133 0
Haematobacter genus 3 11,880 170 218
Halocynthiibacter genus 3 11,091 120 270
Halocyntiibacter_A genus 1 4,537 168 0
Halovulum genus 4 16,163 88 342
Hasllibacter genus 1 2,750 78 0
Heliomarina genus 2 10,296 70 124
IMCC34051 genus 3 10,250 15 247
J013 genus 2 7,200 14 187
JAACUH01 genus 1 3,378 44 0
JAAEUB01 genus 1 3,571 88 0
JAAFHS01 genus 1 3,432 82 0
JAAKGP01 genus 4 16,749 35 205
JAATGA01 genus 1 3,810 84 0
JAAURK01 genus 1 4,740 185 0
JABDJO01 genus 1 3,785 82 0
JABDJX01 genus 1 3,701 101 0
JABSSA01 genus 1 4,478 127 0
JABSSB01 genus 1 3,901 172 0
JABSSC01 genus 1 3,654 146 0
JABURR01 genus 1 3,526 51 0
JACIYW01 genus 1 2,969 58 0
JACMNW01 genus 1 3,084 97 0
JACOMT01 genus 1 3,268 740 0
JACXUX01 genus 1 3,410 68 0
JADQCB01 genus 2 6,473 12 63
JADYZU01 genus 2 5,572 4 68
JAEPMR01 genus 1 3,243 58 0
JAFIEC01 genus 1 3,486 80 0
JAFIEN01 genus 1 4,150 87 0
JAFMHK01 genus 1 3,275 70 0
JAFMPQ01 genus 1 4,370 167 0
JAGRMG01 genus 1 3,695 38 0
JAGRMT01 genus 1 4,090 63 0
JAGRMU01 genus 1 4,345 112 0
JAGSOU01 genus 1 3,531 35 0
JAGYKE01 genus 2 6,659 11 101
JAHDDY01 genus 1 4,137 293 0
JAHDIS01 genus 1 3,813 67 0
JAHDXW01 genus 2 7,576 24 113
JAHEAO01 genus 2 7,313 23 137
JAHEBS01 genus 1 2,814 40 0
JAHEBU01 genus 2 7,245 2 124
JAHEJA01 genus 1 2,695 52 0
JAHQVS01 genus 1 3,777 263 0
JAHTBL01 genus 1 3,640 88 0
JAIUZI01 genus 1 4,842 65 0
JAIVHI01 genus 1 4,031 138 0
JAJDOD01 genus 3 11,210 49 280
JAJEFO01 genus 7 31,108 595 1,575
JAJNPS01 genus 1 3,700 47 0
JAJRUE01 genus 1 3,429 48 0
JAKALB01 genus 1 3,327 51 0
JAKENF01 genus 1 4,041 56 0
JAKGBX01 genus 1 4,238 98 0
JAKVBH01 genus 1 3,220 185 0
JAKVBK01 genus 1 3,125 67 0
JAKVCP01 genus 1 3,478 199 0
JALEFY01 genus 1 2,937 151 0
JALEGB01 genus 1 3,505 243 0
JALQTR01 genus 1 2,225 43 0
JALQXR01 genus 1 3,297 251 0
JALRHZ01 genus 1 2,608 56 0
JALZWD01 genus 2 5,637 18 188
JAMFMB01 genus 1 4,442 89 0
JAMJFX01 genus 1 3,467 36 0
JAMWZF01 genus 1 4,130 121 0
JANSXY01 genus 1 3,964 61 0
JANSXZ01 genus 1 3,443 24 0
JANSYL01 genus 1 2,900 46 0
JANSYP01 genus 1 4,731 172 0
JL08 genus 1 4,276 130 0
Jannaschia genus 15 57,679 765 1,199
Jhaorihella genus 1 3,705 28 0
KMM-3653 genus 1 3,800 61 0
Kangsaoukella genus 1 3,712 69 0
Ketogulonicigenium genus 2 5,786 28 78
LFER01 genus 5 14,555 76 655
LGRT01 genus 2 6,213 61 142
LNNU-3342 genus 1 3,647 88 0
LPB0142 genus 1 3,681 37 0
Leisingera genus 19 88,215 512 869
Lentibacter genus 5 16,341 54 273
Limimaricola genus 7 25,715 330 269
Litoreibacter genus 9 33,295 352 466
Litorimicrobium genus 1 3,871 56 0
Litorivita genus 1 3,272 95 0
Loktanella genus 9 34,499 264 526
Lutimaribacter genus 4 15,069 59 136
M30B80 genus 3 7,614 69 166
MED-G52 genus 16 28,930 375 232
MPNP01 genus 8 24,387 238 1,773
Maliponia genus 1 5,122 54 0
Mameliella genus 2 10,639 56 133
Mangrovicoccus genus 4 24,520 420 809
Marimonas genus 1 4,157 51 0
Marinibacterium genus 3 17,087 57 191
Marinovum genus 3 14,503 31 180
Maritimibacter genus 8 31,433 232 345
Marivita genus 12 50,109 305 650
Marivivens genus 6 19,286 170 250
Meinhardsimonia genus 1 3,023 31 0
Meridianimarinicoccus genus 7 27,498 116 593
Mesobacterium genus 1 5,509 106 0
Monaibacterium genus 1 3,557 65 0
Muriiphilus genus 10 33,785 175 635
N1Y82 genus 2 7,019 15 162
NORP110 genus 2 5,666 22 98
NORP181 genus 2 9,156 21 616
NORP247 genus 1 3,343 92 0
NVQY01 genus 2 6,332 2 117
NVTR01 genus 1 3,003 57 0
Neomegalonema genus 1 3,034 146 0
Neotabrizicola genus 2 8,599 57 184
Nereida genus 2 6,081 16 162
Nioella genus 5 19,083 129 198
OMPR01 genus 1 4,598 99 0
Oceanicella genus 1 2,958 50 0
Oceanicola genus 5 20,392 74 293
Oceaniglobus genus 6 24,067 80 450
Oceanomicrobium genus 1 3,095 44 0
Octadecabacter genus 11 40,734 230 958
PHEG01 genus 1 3,643 106 0
Pacificibacter genus 4 14,143 96 310
Pacificitalea genus 1 3,614 58 0
Paenirhodobacter genus 4 15,353 40 224
Palleronia genus 11 40,806 222 783
Paracoccus genus 91 350,172 5,001 4,622
Pararhodobacter genus 21 80,758 838 1,040
Parasedimentitalea genus 7 32,714 194 872
Paroceanicella genus 2 9,967 132 147
Pelagimonas genus 2 9,590 23 309
Phaeobacter genus 6 23,559 107 368
Phaeobacter_A genus 1 4,731 96 0
Phaeovulum genus 5 15,941 37 223
Pikeienuella genus 1 4,124 102 0
Planktomarina genus 18 44,717 407 930
Planktotalea genus 6 21,809 178 396
Pontibaca genus 2 5,376 2 94
Pontibrevibacter genus 1 3,416 36 0
Ponticoccus genus 1 4,455 50 0
Pontivivens genus 1 3,511 118 0
Pontivivens_A genus 1 4,136 155 0
Poseidonocella genus 2 6,705 6 106
Primorskyibacter genus 3 12,767 67 232
Profundibacter genus 9 26,967 185 593
Profundibacterium genus 1 3,298 94 0
Pseudaestuariivita genus 2 7,247 41 138
Pseudodonghicola genus 1 4,513 48 0
Pseudogemmobacter genus 7 32,294 243 768
Pseudohalocynthiibacter genus 1 3,895 117 0
Pseudooceanicola genus 22 91,674 732 982
Pseudooceanicola_C genus 1 5,328 93 0
Pseudooctadecabacter genus 3 8,724 12 164
Pseudophaeobacter genus 11 47,845 155 959
Pseudophaeobacter_A genus 2 7,630 13 82
Pseudoprimorskyibacter genus 1 3,865 57 0
Pseudorhodobacter genus 6 22,929 87 453
Pseudorhodobacter_B genus 1 3,413 42 0
Pseudoroseicyclus genus 1 3,300 68 0
Pseudoroseicyclus_A genus 1 3,613 70 0
Pseudoruegeria genus 1 3,653 32 0
Pseudosulfitobacter genus 6 26,013 91 264
Pseudotabrizicola genus 10 37,328 130 533
Pseudothioclava genus 1 2,726 19 0
Pukyongiella genus 1 4,105 35 0
Puniceibacterium genus 6 27,628 44 503
QEYE01 genus 1 3,842 81 0
QY30 genus 3 9,008 56 94
Qingshengfaniella genus 1 3,787 91 0
RFGD01 genus 1 3,011 67 0
RFZI01 genus 3 7,967 53 59
Rhabdonatronobacter genus 5 16,160 70 236
Rhodobacter genus 7 25,691 340 270
Rhodobacter_B genus 8 35,577 154 1,144
Rhodobacter_F genus 6 21,870 222 456
Rhodobaculum genus 11 33,760 130 784
Rhodophyticola genus 5 18,628 76 442
Rhodosalinus genus 2 6,851 23 70
Rhodovulum genus 16 58,363 591 617
Roseibacterium genus 3 10,759 34 129
Roseicitreum genus 1 4,119 115 0
Roseicyclus genus 7 24,903 134 421
Roseinatronobacter genus 36 118,056 935 1,921
Roseitranquillus genus 1 3,664 76 0
Roseivivax genus 9 37,001 238 514
Roseobacter genus 9 40,451 261 876
Roseovarius genus 62 229,429 1,196 3,107
Rubellimicrobium genus 8 31,837 344 907
Rubricella genus 1 3,204 78 0
Rubrimonas genus 2 7,838 20 295
Ruegeria genus 48 216,271 2,278 3,282
Ruegeria_B genus 4 18,378 34 141
S012-89 genus 1 2,619 29 0
SAT37 genus 1 3,526 59 0
SELP01 genus 1 3,656 71 0
SKOX01 genus 1 3,347 160 0
SLM-1 genus 1 4,199 68 0
SRXY01 genus 1 4,786 92 0
SW4 genus 1 3,571 60 0
SZUA-547 genus 1 2,089 91 0
SZUA-611 genus 2 6,689 20 84
Sagittula genus 4 19,649 109 364
Salibaculum genus 4 12,821 26 123
Salinihabitans genus 1 3,964 31 0
Salipiger genus 19 96,470 708 1,176
Sedimentimonas genus 2 6,787 22 46
Sedimentitalea genus 2 9,046 11 122
Sediminimonas genus 3 8,427 20 109
Seohaeicola genus 2 9,824 20 148
Shimia genus 22 89,342 506 1,670
Shimia_A genus 1 3,834 27 0
Silicimonas genus 1 4,322 120 0
Solirhodobacter genus 5 18,557 46 317
Stagnihabitans genus 5 17,112 51 242
Sulfitobacter genus 49 191,856 1,082 3,052
Sulfitobacter_E genus 1 3,732 29 0
Sulfitobacter_F genus 2 8,030 89 292
Szabonella genus 1 3,939 57 0
TMP-24 genus 1 3,206 38 0
Tabrizicola genus 21 79,199 466 876
Tabrizicola_A genus 4 14,143 32 136
Tateyamaria genus 9 38,737 199 976
Thalassobacter genus 1 3,597 77 0
Thalassobium genus 1 3,567 126 0
Thalassobius genus 10 37,240 153 460
Thalassococcus genus 1 3,872 42 0
Thalassorhabdomicrobium genus 1 3,303 40 0
Thermohalobaculum genus 3 11,144 130 262
Thioclava genus 14 53,211 374 650
Tranquillimonas genus 3 12,235 6 293
Tropicibacter genus 2 9,106 16 151
Tropicimonas genus 8 39,808 322 831
UBA10365 genus 1 1,874 37 0
UBA10424 genus 1 3,401 110 0
UBA3069 genus 1 3,639 92 0
UBA3077 genus 19 56,107 709 1,344
UBA5972 genus 7 23,637 69 697
UBA6796 genus 1 3,137 25 0
UBA7951 genus 1 3,141 65 0
UBA9554 genus 4 12,986 83 401
UBA996 genus 1 3,729 167 0
Vannielia genus 5 21,473 396 190
WFPA01 genus 1 2,710 125 0
WFVA01 genus 1 2,734 33 0
WKFI01 genus 3 13,354 6 212
WLWX01 genus 1 4,490 266 0
WNWL01 genus 1 5,634 338 0
WX04 genus 2 7,556 21 253
Wagnerdoeblera genus 4 16,420 169 306
Wenxinia genus 2 7,452 19 149
Xinfangfangia genus 1 4,356 53 0
Yoonia genus 34 120,723 896 2,227