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Hierarchical exploration of TRG genes through taxonomy of Bacteria
| Taxon name | Taxon rank | Species (n) | Proteins (n) | TRG genus (n) | TRG species (n) | Details |
|---|---|---|---|---|---|---|
| AAP99 | genus | 2 | 5,988 | 7 | 280 | |
| AHLZ01 | genus | 1 | 4,900 | 73 | 0 | |
| ALPHA2B | genus | 4 | 22,350 | 146 | 230 | |
| Acidovorax | genus | 42 | 194,354 | 1,211 | 2,107 | |
| Acidovorax_A | genus | 13 | 58,661 | 394 | 587 | |
| Acidovorax_C | genus | 4 | 14,067 | 35 | 138 | |
| Acidovorax_F | genus | 1 | 4,644 | 42 | 0 | |
| Albitalea | genus | 4 | 19,860 | 90 | 607 | |
| Alicycliphilus | genus | 6 | 22,874 | 18 | 191 | |
| Aquabacterium | genus | 32 | 120,406 | 1,484 | 1,734 | |
| Aquabacterium_A | genus | 13 | 68,466 | 281 | 1,235 | |
| Aquabacterium_B | genus | 1 | 5,018 | 178 | 0 | |
| Aquariibacter | genus | 2 | 5,686 | 31 | 64 | |
| Aquincola | genus | 2 | 12,188 | 96 | 143 | |
| Azohydromonas | genus | 5 | 33,856 | 871 | 808 | |
| BK-30 | genus | 1 | 2,974 | 38 | 0 | |
| Brachymonas | genus | 7 | 14,529 | 143 | 304 | |
| CADEEN01 | genus | 4 | 14,202 | 34 | 308 | |
| CAIKUF01 | genus | 4 | 17,218 | 18 | 311 | |
| CAIKVZ01 | genus | 5 | 21,461 | 57 | 359 | |
| CAIMXF01 | genus | 5 | 26,534 | 607 | 520 | |
| CAISIP01 | genus | 6 | 28,411 | 47 | 461 | |
| CAJYPV01 | genus | 1 | 4,732 | 114 | 0 | |
| CAKAKO01 | genus | 1 | 5,208 | 95 | 0 | |
| Caldimonas | genus | 1 | 3,412 | 18 | 0 | |
| Calidifontimicrobium | genus | 1 | 3,600 | 47 | 0 | |
| Comamonas | genus | 46 | 192,876 | 2,717 | 2,605 | |
| Comamonas_C | genus | 6 | 18,802 | 30 | 114 | |
| Comamonas_E | genus | 1 | 3,842 | 133 | 0 | |
| Comamonas_F | genus | 2 | 8,276 | 28 | 197 | |
| Curvibacter | genus | 7 | 30,194 | 243 | 399 | |
| Diaphorobacter | genus | 1 | 3,367 | 15 | 0 | |
| Diaphorobacter_A | genus | 6 | 30,780 | 124 | 488 | |
| Extensimonas | genus | 2 | 6,107 | 1 | 45 | |
| G020354665 | genus | 1 | 3,433 | 89 | 0 | |
| Giesbergeria | genus | 25 | 77,969 | 212 | 843 | |
| Hydrogenophaga | genus | 54 | 218,918 | 1,666 | 2,191 | |
| Hylemonella | genus | 21 | 64,070 | 233 | 553 | |
| Ideonella | genus | 17 | 76,572 | 654 | 1,355 | |
| Ideonella_A | genus | 1 | 5,615 | 135 | 0 | |
| Inhella | genus | 5 | 19,060 | 101 | 315 | |
| J223 | genus | 1 | 4,285 | 87 | 0 | |
| JAABQG01 | genus | 5 | 18,487 | 11 | 205 | |
| JAABRC01 | genus | 2 | 6,262 | 4 | 133 | |
| JAAFHN01 | genus | 1 | 3,696 | 207 | 0 | |
| JAAFIP01 | genus | 4 | 14,539 | 46 | 393 | |
| JAAFIW01 | genus | 1 | 4,290 | 90 | 0 | |
| JAAFIY01 | genus | 1 | 3,551 | 83 | 0 | |
| JAAFJR01 | genus | 3 | 8,956 | 65 | 206 | |
| JACDQM01 | genus | 2 | 8,926 | 43 | 113 | |
| JACMQX01 | genus | 1 | 4,011 | 101 | 0 | |
| JADJBS01 | genus | 1 | 4,972 | 149 | 0 | |
| JADJCH01 | genus | 3 | 14,316 | 30 | 184 | |
| JADJDQ01 | genus | 1 | 5,287 | 164 | 0 | |
| JAEMQF01 | genus | 1 | 4,614 | 127 | 0 | |
| JAEUOU01 | genus | 1 | 3,230 | 41 | 0 | |
| JAEUPI01 | genus | 4 | 15,050 | 90 | 216 | |
| JAEWVY01 | genus | 1 | 3,415 | 48 | 0 | |
| JAFALA01 | genus | 1 | 3,541 | 55 | 0 | |
| JAFALK01 | genus | 1 | 4,130 | 86 | 0 | |
| JAFAMW01 | genus | 1 | 2,778 | 26 | 0 | |
| JAFEEF01 | genus | 1 | 5,423 | 116 | 0 | |
| JAGOCV01 | genus | 2 | 8,956 | 102 | 129 | |
| JAGOEY01 | genus | 1 | 2,173 | 36 | 0 | |
| JAHBZM01 | genus | 4 | 16,254 | 43 | 225 | |
| JAHIYE01 | genus | 1 | 3,645 | 32 | 0 | |
| JAKFVA01 | genus | 1 | 2,536 | 46 | 0 | |
| JAKZFD01 | genus | 1 | 4,296 | 51 | 0 | |
| JALGBI01 | genus | 1 | 4,619 | 34 | 0 | |
| JALQUL01 | genus | 1 | 2,701 | 106 | 0 | |
| JALRFN01 | genus | 2 | 5,132 | 6 | 133 | |
| KK5 | genus | 1 | 6,493 | 115 | 0 | |
| Kinneretia | genus | 3 | 13,958 | 21 | 117 | |
| LMDS01 | genus | 2 | 9,271 | 0 | 179 | |
| Lampropedia | genus | 8 | 24,317 | 123 | 578 | |
| Leptothrix | genus | 2 | 8,409 | 9 | 105 | |
| Limnohabitans | genus | 63 | 169,433 | 2,250 | 2,774 | |
| Limnohabitans_A | genus | 54 | 172,111 | 1,163 | 1,841 | |
| MR-S7 | genus | 1 | 4,718 | 33 | 0 | |
| Macromonas | genus | 1 | 2,520 | 55 | 0 | |
| Malikia | genus | 2 | 6,945 | 33 | 73 | |
| Melaminivora | genus | 1 | 3,351 | 67 | 0 | |
| Melaminivora_A | genus | 2 | 6,928 | 2 | 53 | |
| Methylibium | genus | 6 | 24,447 | 183 | 445 | |
| Mitsuaria | genus | 7 | 37,342 | 528 | 497 | |
| Oryzisolibacter | genus | 1 | 3,382 | 18 | 0 | |
| Ottowia | genus | 26 | 90,866 | 563 | 1,921 | |
| PBB1 | genus | 7 | 19,243 | 108 | 232 | |
| PCRC01 | genus | 1 | 3,183 | 54 | 0 | |
| PGEI01 | genus | 1 | 3,453 | 35 | 0 | |
| PHCI01 | genus | 1 | 3,600 | 29 | 0 | |
| Paucibacter | genus | 2 | 11,044 | 72 | 87 | |
| Paucibacter_A | genus | 9 | 43,214 | 193 | 555 | |
| Pelomonas | genus | 19 | 98,197 | 1,131 | 1,207 | |
| Piscinibacter | genus | 7 | 37,614 | 203 | 603 | |
| Polaromonas | genus | 46 | 183,401 | 1,179 | 3,188 | |
| Polyangium_A | genus | 1 | 5,525 | 187 | 0 | |
| Pseudacidovorax | genus | 5 | 26,749 | 185 | 195 | |
| Pseudorhodoferax | genus | 7 | 43,355 | 512 | 550 | |
| Pseudorivibacter | genus | 1 | 5,597 | 147 | 0 | |
| Pulveribacter | genus | 2 | 6,172 | 5 | 19 | |
| RFTU01 | genus | 5 | 12,663 | 120 | 190 | |
| RFXW01 | genus | 2 | 4,323 | 35 | 52 | |
| RS62 | genus | 4 | 9,245 | 31 | 220 | |
| Ramlibacter | genus | 43 | 207,639 | 3,185 | 4,015 | |
| Rhizobacter | genus | 12 | 63,457 | 736 | 1,087 | |
| Rhodoferax | genus | 78 | 294,757 | 1,552 | 5,994 | |
| Rhodoferax_A | genus | 5 | 19,270 | 54 | 305 | |
| Rhodoferax_B | genus | 2 | 10,614 | 3 | 156 | |
| Rhodoferax_C | genus | 59 | 218,129 | 937 | 3,895 | |
| Rivibacter | genus | 1 | 3,652 | 49 | 0 | |
| Roseateles | genus | 3 | 14,589 | 116 | 291 | |
| Rubrivivax | genus | 60 | 270,318 | 1,290 | 4,352 | |
| Rubrivivax_A | genus | 6 | 27,711 | 82 | 444 | |
| S2-27 | genus | 1 | 5,181 | 145 | 0 | |
| SCMQ01 | genus | 1 | 4,488 | 36 | 0 | |
| Saezia | genus | 1 | 3,218 | 306 | 0 | |
| Schlegelella | genus | 1 | 3,601 | 55 | 0 | |
| Schlegelella_A | genus | 4 | 19,867 | 70 | 536 | |
| Serpentinimonas | genus | 3 | 7,049 | 15 | 28 | |
| Sphaerotilus | genus | 7 | 28,568 | 260 | 297 | |
| Symbiobacter | genus | 1 | 2,466 | 90 | 0 | |
| Tepidicella | genus | 2 | 5,364 | 0 | 23 | |
| Tepidimonas | genus | 10 | 25,358 | 84 | 234 | |
| Thiomonas | genus | 38 | 121,225 | 2,381 | 1,873 | |
| Tibeticola | genus | 2 | 5,494 | 6 | 73 | |
| UBA2334 | genus | 5 | 16,750 | 44 | 403 | |
| UBA997 | genus | 1 | 2,311 | 35 | 0 | |
| VBDL01 | genus | 1 | 4,731 | 137 | 0 | |
| Variovorax | genus | 73 | 452,881 | 6,746 | 4,542 | |
| WAJ17 | genus | 1 | 4,718 | 131 | 0 | |
| WNDY01 | genus | 1 | 4,653 | 104 | 0 | |
| Xenophilus | genus | 1 | 6,311 | 76 | 0 | |
| Xylophilus | genus | 7 | 28,964 | 170 | 836 | |
| Zhizhongheella | genus | 1 | 3,451 | 19 | 0 |