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Hierarchical exploration of TRG genes through taxonomy of Bacteria
Taxon name | Taxon rank | Species (n) | Proteins (n) | TRG genus (n) | TRG species (n) | Details |
---|---|---|---|---|---|---|
AKCV01 | genus | 1 | 3,520 | 105 | 0 | |
AVCC01 | genus | 3 | 10,656 | 61 | 288 | |
BOG-994 | genus | 2 | 8,687 | 87 | 342 | |
Burkholderia | genus | 67 | 443,039 | 6,008 | 4,732 | |
CAHJXF01 | genus | 1 | 3,657 | 235 | 0 | |
CAILRJ01 | genus | 5 | 19,563 | 150 | 636 | |
CAJCHO01 | genus | 1 | 3,311 | 95 | 0 | |
CAJCIC01 | genus | 1 | 3,516 | 128 | 0 | |
CTSOIL-112 | genus | 3 | 5,075 | 59 | 103 | |
Caballeronia | genus | 53 | 370,874 | 6,459 | 8,375 | |
Chitinasiproducens | genus | 1 | 4,554 | 245 | 0 | |
Collimonas | genus | 14 | 65,611 | 779 | 1,205 | |
Cupriavidus | genus | 56 | 360,749 | 8,694 | 4,559 | |
Derxia | genus | 2 | 8,931 | 106 | 108 | |
Duganella | genus | 34 | 190,006 | 1,490 | 1,249 | |
Formosimonas | genus | 2 | 4,187 | 0 | 210 | |
Glaciimonas | genus | 5 | 21,125 | 123 | 1,239 | |
Glomeribacter | genus | 2 | 4,734 | 142 | 551 | |
Herbaspirillum | genus | 29 | 131,870 | 2,642 | 1,767 | |
Herminiimonas | genus | 8 | 26,695 | 158 | 510 | |
Hydromonas | genus | 2 | 4,786 | 19 | 239 | |
JACPVY01 | genus | 1 | 3,229 | 212 | 0 | |
JADYYQ01 | genus | 1 | 2,304 | 252 | 0 | |
JAEZLB01 | genus | 2 | 5,074 | 44 | 175 | |
JAGKXB01 | genus | 1 | 1,971 | 82 | 0 | |
JAIZVZ01 | genus | 1 | 3,776 | 96 | 0 | |
Janthinobacterium | genus | 36 | 195,597 | 2,299 | 1,876 | |
LMUX01 | genus | 1 | 5,865 | 196 | 0 | |
LX47W | genus | 3 | 15,414 | 26 | 110 | |
Lacisediminimonas | genus | 2 | 7,940 | 35 | 279 | |
Limnobacter | genus | 13 | 38,950 | 1,494 | 1,100 | |
MESE01 | genus | 1 | 4,983 | 265 | 0 | |
Mycetohabitans | genus | 8 | 15,692 | 436 | 701 | |
Mycoavidus | genus | 3 | 5,788 | 126 | 234 | |
Noviherbaspirillum | genus | 14 | 71,484 | 802 | 2,145 | |
Noviherbaspirillum_A | genus | 3 | 16,089 | 322 | 597 | |
Noviherbaspirillum_B | genus | 2 | 6,588 | 0 | 166 | |
Noviherbaspirillum_C | genus | 2 | 8,663 | 0 | 339 | |
Oxalicibacterium | genus | 4 | 11,935 | 72 | 159 | |
Oxalobacter | genus | 17 | 33,967 | 1,189 | 1,355 | |
PKWO01 | genus | 2 | 7,011 | 14 | 313 | |
Pandoraea | genus | 31 | 152,060 | 4,692 | 2,125 | |
Paraburkholderia | genus | 138 | 1,034,391 | 15,686 | 18,105 | |
Pararobbsia | genus | 2 | 11,873 | 54 | 485 | |
Parvibium | genus | 1 | 2,473 | 96 | 0 | |
Paucimonas | genus | 6 | 21,823 | 101 | 365 | |
Polynucleobacter | genus | 143 | 302,797 | 7,466 | 3,462 | |
Protistobacter | genus | 1 | 3,216 | 200 | 0 | |
Pseudoduganella | genus | 30 | 171,660 | 1,675 | 1,630 | |
QZKY01 | genus | 3 | 6,506 | 69 | 163 | |
Ralstonia | genus | 20 | 101,883 | 2,247 | 1,307 | |
Robbsia | genus | 1 | 5,668 | 470 | 0 | |
Rugamonas | genus | 3 | 17,410 | 42 | 218 | |
SCTK01 | genus | 1 | 2,397 | 92 | 0 | |
SXZD01 | genus | 2 | 5,069 | 78 | 224 | |
SYFN01 | genus | 15 | 40,845 | 974 | 920 | |
Solimicrobium | genus | 6 | 20,434 | 98 | 954 | |
Telluria | genus | 78 | 406,126 | 5,760 | 4,813 | |
Trinickia | genus | 13 | 81,023 | 341 | 1,648 | |
UBA4657 | genus | 1 | 2,344 | 78 | 0 | |
UBA5157 | genus | 1 | 4,658 | 281 | 0 | |
Undibacterium | genus | 35 | 144,410 | 2,652 | 3,563 |