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Hierarchical exploration of TRG genes through taxonomy of Bacteria
Taxon name | Taxon rank | Species (n) | Proteins (n) | TRG genus (n) | TRG species (n) | Details |
---|---|---|---|---|---|---|
20-60-12 | genus | 1 | 2,825 | 72 | 0 | |
69-11 | genus | 2 | 10,664 | 114 | 264 | |
70-18 | genus | 1 | 4,639 | 72 | 0 | |
Acetobacter | genus | 46 | 143,974 | 4,164 | 4,006 | |
Acidibrevibacterium | genus | 7 | 21,557 | 236 | 196 | |
Acidicaldus | genus | 1 | 3,157 | 345 | 0 | |
Acidiphilium | genus | 10 | 31,400 | 285 | 1,102 | |
Acidisoma | genus | 4 | 21,230 | 259 | 880 | |
Acidisphaera | genus | 1 | 4,517 | 351 | 0 | |
Acidocella | genus | 26 | 71,041 | 1,091 | 1,425 | |
Acidomonas | genus | 1 | 3,463 | 75 | 0 | |
Ameyamaea | genus | 1 | 3,440 | 150 | 0 | |
Asaia | genus | 8 | 26,015 | 455 | 712 | |
BOG-908 | genus | 2 | 6,954 | 22 | 271 | |
BOG-930 | genus | 5 | 23,045 | 163 | 968 | |
BOG-934 | genus | 2 | 11,555 | 46 | 525 | |
Belnapia | genus | 6 | 35,481 | 453 | 663 | |
Bombella | genus | 6 | 10,660 | 220 | 134 | |
CADCTG01 | genus | 2 | 8,236 | 66 | 179 | |
CAHJXG01 | genus | 1 | 3,622 | 174 | 0 | |
CAIMOR01 | genus | 2 | 11,076 | 146 | 181 | |
CAIPHQ01 | genus | 1 | 5,186 | 134 | 0 | |
CAIQQQ01 | genus | 5 | 20,704 | 144 | 710 | |
CAIRTN01 | genus | 2 | 9,472 | 14 | 266 | |
CAITOL01 | genus | 2 | 8,315 | 28 | 189 | |
CAITYE01 | genus | 1 | 4,645 | 173 | 0 | |
CAIVDX01 | genus | 1 | 4,355 | 146 | 0 | |
CAIXEA01 | genus | 5 | 26,590 | 157 | 719 | |
CAIYPH01 | genus | 4 | 21,480 | 282 | 436 | |
CAJCIS01 | genus | 2 | 7,498 | 26 | 426 | |
CAJCJG01 | genus | 2 | 8,783 | 23 | 274 | |
CAMDGX01 | genus | 4 | 18,517 | 244 | 377 | |
Caldovatus | genus | 3 | 12,757 | 121 | 290 | |
Commensalibacter | genus | 4 | 8,049 | 199 | 192 | |
Crenalkalicoccus | genus | 1 | 4,231 | 75 | 0 | |
Elioraea | genus | 3 | 10,913 | 73 | 173 | |
Elioraea_A | genus | 3 | 12,166 | 109 | 240 | |
Endobacter | genus | 1 | 3,383 | 145 | 0 | |
Entomobacter | genus | 1 | 2,373 | 259 | 0 | |
Falsiroseomonas | genus | 10 | 57,180 | 758 | 790 | |
Formicincola | genus | 1 | 1,750 | 222 | 0 | |
G004843345 | genus | 2 | 3,872 | 387 | 234 | |
G192 | genus | 1 | 5,814 | 177 | 0 | |
Gluconacetobacter | genus | 12 | 46,034 | 744 | 781 | |
Gluconobacter | genus | 13 | 38,401 | 337 | 435 | |
Gluconobacter_A | genus | 5 | 16,123 | 123 | 320 | |
Gluconobacter_B | genus | 1 | 2,569 | 57 | 0 | |
Gluconobacter_C | genus | 1 | 2,713 | 89 | 0 | |
Granulibacter | genus | 2 | 4,910 | 145 | 80 | |
Humitalea | genus | 1 | 4,687 | 56 | 0 | |
JADYYZ01 | genus | 1 | 3,901 | 110 | 0 | |
JADZEB01 | genus | 1 | 3,987 | 95 | 0 | |
JAEWCI01 | genus | 1 | 3,995 | 139 | 0 | |
JAFAHH01 | genus | 1 | 6,731 | 883 | 0 | |
JAFAXA01 | genus | 1 | 3,618 | 115 | 0 | |
JAFAYA01 | genus | 2 | 6,730 | 22 | 140 | |
JAFEFJ01 | genus | 1 | 4,579 | 116 | 0 | |
JAFKFI01 | genus | 1 | 5,586 | 160 | 0 | |
JAFKFJ01 | genus | 6 | 27,190 | 138 | 660 | |
JAIEOP01 | genus | 1 | 6,092 | 208 | 0 | |
JAIMBF01 | genus | 1 | 3,047 | 78 | 0 | |
JAJXVA01 | genus | 1 | 2,428 | 102 | 0 | |
JAJXXT01 | genus | 4 | 13,676 | 152 | 217 | |
JAJZFF01 | genus | 1 | 4,335 | 22 | 0 | |
JAJZHU01 | genus | 1 | 2,637 | 106 | 0 | |
JAJZVS01 | genus | 5 | 18,015 | 117 | 451 | |
JAJZVV01 | genus | 2 | 6,400 | 23 | 44 | |
JAKAWQ01 | genus | 1 | 4,298 | 165 | 0 | |
JALPRX01 | genus | 1 | 5,726 | 300 | 0 | |
JAMXLO01 | genus | 1 | 6,385 | 441 | 0 | |
JANWXJ01 | genus | 1 | 3,056 | 93 | 0 | |
KACC-21507 | genus | 1 | 1,872 | 48 | 0 | |
KSS12 | genus | 1 | 3,408 | 133 | 0 | |
Komagataeibacter | genus | 19 | 67,406 | 1,628 | 1,302 | |
Kozakia | genus | 1 | 3,393 | 142 | 0 | |
LMUY01 | genus | 1 | 6,169 | 380 | 0 | |
Lichenicoccus | genus | 1 | 4,360 | 174 | 0 | |
Lichenicola | genus | 4 | 15,986 | 179 | 417 | |
Neoasaia | genus | 1 | 3,146 | 79 | 0 | |
Neokomagataea | genus | 3 | 7,250 | 65 | 225 | |
Novacetimonas | genus | 4 | 13,227 | 173 | 347 | |
Oecophyllibacter | genus | 1 | 1,664 | 100 | 0 | |
PALSA-911 | genus | 2 | 11,160 | 11 | 452 | |
Palsa-883 | genus | 1 | 7,583 | 565 | 0 | |
Paracraurococcus | genus | 6 | 36,577 | 270 | 906 | |
REEB85 | genus | 1 | 3,468 | 80 | 0 | |
Rhodopila | genus | 11 | 66,714 | 1,029 | 2,451 | |
Rhodovarius | genus | 6 | 23,995 | 138 | 600 | |
Rhodovastum | genus | 1 | 6,645 | 354 | 0 | |
Roseococcus | genus | 13 | 54,667 | 503 | 1,162 | |
Roseomonas | genus | 13 | 68,021 | 1,411 | 1,199 | |
Roseomonas_B | genus | 37 | 162,086 | 2,745 | 2,028 | |
Roseomonas_C | genus | 2 | 11,151 | 29 | 356 | |
Roseomonas_D | genus | 17 | 83,161 | 1,253 | 1,739 | |
SHWF01 | genus | 2 | 5,687 | 37 | 242 | |
Saccharibacter | genus | 3 | 6,325 | 151 | 200 | |
Siccirubricoccus | genus | 3 | 17,644 | 108 | 415 | |
Swaminathania | genus | 1 | 2,504 | 27 | 0 | |
Swingsia | genus | 1 | 2,041 | 36 | 0 | |
Tanticharoenia | genus | 1 | 3,214 | 142 | 0 | |
UBA6159 | genus | 3 | 14,134 | 86 | 391 |