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Hierarchical exploration of TRG genes through taxonomy of Bacteria


Taxon name Taxon rank Species (n) Proteins (n) TRG genus (n) TRG species (n) Details
Lactobacillus absiana species 1 2,020 85 59
Lactobacillus acetotolerans species 1 1,558 27 36
Lactobacillus acidophilus species 1 1,880 89 22
Lactobacillus amylolyticus species 1 1,605 64 32
Lactobacillus amylovorus species 1 2,198 119 30
Lactobacillus apis species 1 1,558 39 16
Lactobacillus bombicola species 1 1,613 64 40
Lactobacillus colini species 1 2,144 55 67
Lactobacillus corticis species 1 1,748 29 71
Lactobacillus crispatus species 1 2,166 103 35
Lactobacillus delbrueckii species 1 1,825 121 19
Lactobacillus delbrueckii_B species 1 1,449 71 16
Lactobacillus equicursoris species 1 1,958 79 61
Lactobacillus gallinarum species 1 1,963 115 7
Lactobacillus gasseri species 1 1,808 80 14
Lactobacillus gigeriorum species 1 1,933 70 70
Lactobacillus hamsteri species 1 1,836 72 31
Lactobacillus helsingborgensis species 1 1,829 56 51
Lactobacillus helveticus species 1 1,977 106 33
Lactobacillus hominis species 1 1,897 72 97
Lactobacillus huangpiensis species 1 1,827 89 14
Lactobacillus iners species 1 1,196 15 20
Lactobacillus intestinalis species 1 1,864 89 32
Lactobacillus jensenii species 1 1,521 52 26
Lactobacillus johnsonii species 1 1,785 68 19
Lactobacillus kalixensis species 1 1,974 65 55
Lactobacillus kefiranofaciens species 1 2,403 129 108
Lactobacillus kimbladii_A species 1 1,980 76 17
Lactobacillus kimbladii_B species 1 1,828 101 16
Lactobacillus kitasatonis species 1 2,062 127 35
Lactobacillus kullabergensis species 1 1,946 74 9
Lactobacillus laiwuensis species 1 1,905 75 8
Lactobacillus melliventris species 1 1,881 69 6
Lactobacillus mulieris species 1 1,495 48 18
Lactobacillus nasalidis species 1 2,669 169 76
Lactobacillus panisapium species 1 2,020 52 36
Lactobacillus paragasseri species 1 1,811 77 10
Lactobacillus pasteurii species 1 1,819 56 58
Lactobacillus psittaci species 1 1,356 36 19
Lactobacillus pullistercoris species 1 1,857 84 45
Lactobacillus rodentium species 1 1,458 35 30
Lactobacillus sp002417825 species 1 985 9 26
Lactobacillus sp002418055 species 1 1,097 16 12
Lactobacillus sp003692965 species 1 1,593 56 41
Lactobacillus sp007570935 species 1 1,896 85 62
Lactobacillus sp014803895 species 1 1,952 76 124
Lactobacillus sp014803905 species 1 821 16 2
Lactobacillus sp014803915 species 1 1,709 60 25
Lactobacillus sp016100975 species 1 1,915 72 20
Lactobacillus sp022483245 species 1 1,515 35 43
Lactobacillus sp022641965 species 1 819 24 7
Lactobacillus sp905214545 species 1 1,207 17 12
Lactobacillus sp910589175 species 1 1,921 81 23
Lactobacillus sp910589675 species 1 1,650 72 12
Lactobacillus sp930989465 species 1 1,161 70 11
Lactobacillus sp944327175 species 1 1,638 90 14
Lactobacillus sp945281075 species 1 1,814 47 28
Lactobacillus sp945290125 species 1 2,084 62 16
Lactobacillus taiwanensis species 1 1,841 67 24
Lactobacillus ultunensis species 1 2,134 102 43
Lactobacillus xujianguonis species 1 2,300 136 126