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Regulatory Sequences
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Protein Classification
Low seq identity (<40%)
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High seq identity (≥40%)
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Gene Trees
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Genome-based Phylogeny
Full genome sequences
E.coli
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Plants
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Fish mtDNA
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Unassembled reads
E.coli
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Plants
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Horizontal Gene Transfer
Full genome sequences
27 Ecoli/Shigella
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8 Yersinia
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Simulated genomes
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AF Team
Department of Computational Biology, University of Adam Mickiewicz
Andrzej Zielezinski, Wojciech M. Karlowski
Department of Bioinformatics, University of Göttingen
Burkhard Morgenstern, Chris-Andre Leimeister, Thomas Dencker, Anna K. Lau, Sophie Röhling
Department of Biological Sciences, University of Southern California
Fengzhu Sun, Michael S. Waterman, Kujin Tang
Tandy School of Computer Science, The University of Tulsa
Hani Z. Girgis, Benjamin T. James
National Cancer Institute (NIH/NCI)
Jonas S. Almeida
Department of Chemistry, University of California
Sung-Hou Kim, JaeJin Choi
Institute for Molecular Bioscience, The University of Queensland
Cheong Xin Chan
Sorbonne Université
Guillaume Bernard
INESC-ID, Instituto Superior Técnico, Universidade de Lisboa
Susana Vinga
Department of Information Engineering, University of Padova
Matteo Comin
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